More details about my recent publications focussed on single-cell tracking approach from time-lapse microscopy data can be found in my DeepTree repository or in the following publications:

Learning dynamic image representations for self-supervised cell cycle annotation Ulicna K, Kelkar M, Soelistyo CJ, Charras GT & Lowe AR ICML Computational Biology Workshop (2023) Links: Workshop | bioRxiv

Perspective: Machine learning enhanced cell tracking Soelistyo, C.J., Ulicna, K. & Lowe, A.R. Frontiers in Bioinformatics, Expert Opinions in Computational Bioimaging (2023) Links: Frontiers

Convolutional neural networks for classifying chromatin morphology in live cell imaging Ulicna K, Ho LTL, Soelistyo CJ, Day NJ & Lowe AR Methods in Molecular Biology, Springer Nature Protocols (2022) Links: Springer

Automated deep lineage tree analysis using a Bayesian single cell tracking approach Ulicna K, Vallardi G, Charras G & Lowe AR Frontiers in Computer Science, Computer Vision: Methods & Tools for Bioimage Analysis (2021) Links: Frontiers | bioRxiv